public final class EbiDbEntry extends java.lang.Object implements SequenceDatabaseEntry
Modifier and Type | Method and Description |
---|---|
java.lang.Object |
clone() |
static SequenceDatabaseEntry |
createInstanceFromPlainText(java.util.List<java.lang.String> lines) |
static SequenceDatabaseEntry |
createInstanceFromPlainTextForRefSeq(java.util.List<java.lang.String> lines) |
java.lang.String |
getAccession() |
java.lang.String |
getProvider() |
java.lang.String |
getSequenceName() |
java.lang.String |
getSequenceSymbol() |
java.lang.String |
getTaxonomyIdentifier() |
java.lang.String |
getTaxonomyScientificName() |
boolean |
isEmpty() |
void |
setProvider(java.lang.String provider) |
public java.lang.Object clone() throws java.lang.CloneNotSupportedException
clone
in class java.lang.Object
java.lang.CloneNotSupportedException
public static SequenceDatabaseEntry createInstanceFromPlainTextForRefSeq(java.util.List<java.lang.String> lines)
public static SequenceDatabaseEntry createInstanceFromPlainText(java.util.List<java.lang.String> lines)
public java.lang.String getAccession()
getAccession
in interface SequenceDatabaseEntry
public java.lang.String getSequenceName()
getSequenceName
in interface SequenceDatabaseEntry
public java.lang.String getTaxonomyScientificName()
getTaxonomyScientificName
in interface SequenceDatabaseEntry
public java.lang.String getTaxonomyIdentifier()
getTaxonomyIdentifier
in interface SequenceDatabaseEntry
public java.lang.String getSequenceSymbol()
getSequenceSymbol
in interface SequenceDatabaseEntry
public boolean isEmpty()
isEmpty
in interface SequenceDatabaseEntry
public java.lang.String getProvider()
getProvider
in interface SequenceDatabaseEntry
public void setProvider(java.lang.String provider)